There are two rivers within the wilderness area along which canoeing is possible. The Rivers Palojoki and Tarvantojoki are both quite narrow and are both well-suited for beginners to try out their skills and for proper excursions. Of the rivers Palojoki is the easiest to reach.

• The River Palojoki (60 km) follows the eastern boundary of Tarvantovaara Wilderness Area part of its way. Its source is at Lake Palojärvi and it flows into the River Muoniojoki. Canoeists can start their water excursion from Lake Palojärvi from a bridge located halfway between the villages of Leppäjärvi and Palojärvi. The canoe trip from there to the village of Palojoensuu is about 60 km long. Almost the entire length of the River Palojoki can be canoed. Only Perjantaikoski Rapids halfway down the river are difficult to paddle down. When the water is shallow the river is rocky. The River Palojoki is a wilderness river which draws fishers as it has a rich assortment of fish inhabiting it.

• The River Tarvantojoki (30 km) runs through the centre of the wilderness area. Its source is near the Norwegian border and it empties into the River Muoniojoki. You can only get to the upper course of the river by flying, but the section between the villages of Kultima and Kuttanen, on its lower course, is great for a short day trip. As there are vast mires on the riverbank you can stop to pick cloudberries on your canoe trip.